Cluster: HRGMv2_2043_CGC26
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2043
- CGC Family ID: CGCFAM_01926
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2043_16 | HRGMv2_2043_16_13 | 15858 | 17765 | - | 1.C.105.2.8 |
| pfam | HRGMv2_2043_16 | HRGMv2_2043_16_14 | 17762 | 18826 | - | Metallophos | Metallophos_2 |
| NULL(UNKNOWN) | HRGMv2_2043_16 | HRGMv2_2043_16_15 | 18844 | 20952 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2043_16 | HRGMv2_2043_16_16 | 21067 | 23022 | - | CBM48 | GH13_9 |
| pfam | HRGMv2_2043_16 | HRGMv2_2043_16_17 | 23045 | 25342 | - | Aconitase | Aconitase_C |
| CAZyme | HRGMv2_2043_16 | HRGMv2_2043_16_18 | 25697 | 26827 | + | GT4 |
| CAZyme | HRGMv2_2043_16 | HRGMv2_2043_16_19 | 27040 | 29805 | - | GH3 |
| pfam | HRGMv2_2043_16 | HRGMv2_2043_16_20 | 30387 | 32240 | - | LRR_5 |
| pfam | HRGMv2_2043_16 | HRGMv2_2043_16_21 | 32485 | 32748 | - | Ribosomal_S18 |
| TC | HRGMv2_2043_16 | HRGMv2_2043_16_22 | 32803 | 33252 | - | 3.A.7.19.1 |
| pfam | HRGMv2_2043_16 | HRGMv2_2043_16_23 | 33279 | 33569 | - | Ribosomal_S6 |
| NULL(UNKNOWN) | HRGMv2_2043_16 | HRGMv2_2043_16_24 | 33687 | 34466 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2043_16 | HRGMv2_2043_16_25 | 34460 | 35158 | - | 3.A.1.132.6 |
Gene ID: HRGMv2_2043_16_13
Type: TC
Location: 15858 - 17765 (-)
Type: TC
Location: 15858 - 17765 (-)
Gene ID: HRGMv2_2043_16_14
Type: pfam
Location: 17762 - 18826 (-)
Type: pfam
Location: 17762 - 18826 (-)
Gene ID: HRGMv2_2043_16_15
Type:
Location: 18844 - 20952 (-)
Type:
Location: 18844 - 20952 (-)
Gene ID: HRGMv2_2043_16_16
Type: CAZyme
Location: 21067 - 23022 (-)
Type: CAZyme
Location: 21067 - 23022 (-)
Gene ID: HRGMv2_2043_16_17
Type: pfam
Location: 23045 - 25342 (-)
Type: pfam
Location: 23045 - 25342 (-)
Gene ID: HRGMv2_2043_16_18
Type: CAZyme
Location: 25697 - 26827 (+)
Type: CAZyme
Location: 25697 - 26827 (+)
Gene ID: HRGMv2_2043_16_19
Type: CAZyme
Location: 27040 - 29805 (-)
Type: CAZyme
Location: 27040 - 29805 (-)
Gene ID: HRGMv2_2043_16_20
Type: pfam
Location: 30387 - 32240 (-)
Type: pfam
Location: 30387 - 32240 (-)
Gene ID: HRGMv2_2043_16_21
Type: pfam
Location: 32485 - 32748 (-)
Type: pfam
Location: 32485 - 32748 (-)
Gene ID: HRGMv2_2043_16_22
Type: TC
Location: 32803 - 33252 (-)
Type: TC
Location: 32803 - 33252 (-)
Gene ID: HRGMv2_2043_16_23
Type: pfam
Location: 33279 - 33569 (-)
Type: pfam
Location: 33279 - 33569 (-)
Gene ID: HRGMv2_2043_16_24
Type:
Location: 33687 - 34466 (-)
Type:
Location: 33687 - 34466 (-)
Gene ID: HRGMv2_2043_16_25
Type: TC
Location: 34460 - 35158 (-)
Type: TC
Location: 34460 - 35158 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp000434315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.