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Cluster: HRGMv2_2043_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2043_12 HRGMv2_2043_12_51 69288 70193 - GH17
CAZyme HRGMv2_2043_12 HRGMv2_2043_12_52 70388 73084 - GH94
CAZyme HRGMv2_2043_12 HRGMv2_2043_12_53 73263 76442 - GH161
TF HRGMv2_2043_12 HRGMv2_2043_12_54 76504 77508 - LacI
CAZyme HRGMv2_2043_12 HRGMv2_2043_12_55 77576 78937 - GH16_3
CAZyme HRGMv2_2043_12 HRGMv2_2043_12_56 78947 79963 - GH16_3
TC HRGMv2_2043_12 HRGMv2_2043_12_57 79966 80919 - 3.A.1.1.47
TC HRGMv2_2043_12 HRGMv2_2043_12_58 80909 82393 - 3.A.1.1.48
pfam HRGMv2_2043_12 HRGMv2_2043_12_59 82393 84888 - DUF5696
pfam HRGMv2_2043_12 HRGMv2_2043_12_60 84872 86944 - Yip1
TC HRGMv2_2043_12 HRGMv2_2043_12_61 86958 87827 - 3.A.1.1.39
TC HRGMv2_2043_12 HRGMv2_2043_12_62 87845 88774 - 3.A.1.1.23
Gene ID: HRGMv2_2043_12_51
Type: CAZyme
Location: 69288 - 70193 (-)
Gene ID: HRGMv2_2043_12_52
Type: CAZyme
Location: 70388 - 73084 (-)
Gene ID: HRGMv2_2043_12_53
Type: CAZyme
Location: 73263 - 76442 (-)
Gene ID: HRGMv2_2043_12_54
Type: TF
Location: 76504 - 77508 (-)
Gene ID: HRGMv2_2043_12_55
Type: CAZyme
Location: 77576 - 78937 (-)
Gene ID: HRGMv2_2043_12_56
Type: CAZyme
Location: 78947 - 79963 (-)
Gene ID: HRGMv2_2043_12_57
Type: TC
Location: 79966 - 80919 (-)
Gene ID: HRGMv2_2043_12_58
Type: TC
Location: 80909 - 82393 (-)
Gene ID: HRGMv2_2043_12_59
Type: pfam
Location: 82393 - 84888 (-)
Gene ID: HRGMv2_2043_12_60
Type: pfam
Location: 84872 - 86944 (-)
Gene ID: HRGMv2_2043_12_61
Type: TC
Location: 86958 - 87827 (-)
Gene ID: HRGMv2_2043_12_62
Type: TC
Location: 87845 - 88774 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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