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Cluster: HRGMv2_2043_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2043_10 HRGMv2_2043_10_45 51667 53475 + 3.A.16.1.1
CAZyme HRGMv2_2043_10 HRGMv2_2043_10_46 53932 55956 + GH13_39
peptidase HRGMv2_2043_10 HRGMv2_2043_10_47 56431 57273 - C60.002
TC HRGMv2_2043_10 HRGMv2_2043_10_48 58073 59827 + 8.A.59.2.1
TF HRGMv2_2043_10 HRGMv2_2043_10_49 59920 61470 + HTH_AraC | HTH_AraC
STP HRGMv2_2043_10 HRGMv2_2043_10_50 61590 62903 + SBP_bac_1
TC HRGMv2_2043_10 HRGMv2_2043_10_51 62924 63808 + 3.A.1.1.11
TC HRGMv2_2043_10 HRGMv2_2043_10_52 63818 64648 + 3.A.1.1.18
Gene ID: HRGMv2_2043_10_45
Type: TC
Location: 51667 - 53475 (+)
Gene ID: HRGMv2_2043_10_46
Type: CAZyme
Location: 53932 - 55956 (+)
Gene ID: HRGMv2_2043_10_47
Type: peptidase
Location: 56431 - 57273 (-)
Gene ID: HRGMv2_2043_10_48
Type: TC
Location: 58073 - 59827 (+)
Gene ID: HRGMv2_2043_10_49
Type: TF
Location: 59920 - 61470 (+)
Gene ID: HRGMv2_2043_10_50
Type: STP
Location: 61590 - 62903 (+)
Gene ID: HRGMv2_2043_10_51
Type: TC
Location: 62924 - 63808 (+)
Gene ID: HRGMv2_2043_10_52
Type: TC
Location: 63818 - 64648 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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