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Cluster: HRGMv2_2043_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2043_9 HRGMv2_2043_9_59 72594 74987 + GH94
pfam HRGMv2_2043_9 HRGMv2_2043_9_60 75013 76428 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC HRGMv2_2043_9 HRGMv2_2043_9_61 76553 78349 + 8.A.59.2.1
STP HRGMv2_2043_9 HRGMv2_2043_9_62 78602 79915 + SBP_bac_1
TC HRGMv2_2043_9 HRGMv2_2043_9_63 79995 80891 + 3.A.1.1.23
TC HRGMv2_2043_9 HRGMv2_2043_9_64 80906 81763 + 3.A.1.1.8
TF HRGMv2_2043_9 HRGMv2_2043_9_65 81779 82627 + HTH_AraC
pfam HRGMv2_2043_9 HRGMv2_2043_9_66 82628 83335 + Glucosamine_iso
CAZyme HRGMv2_2043_9 HRGMv2_2043_9_67 83468 84703 + CE9
pfam HRGMv2_2043_9 HRGMv2_2043_9_68 84794 85399 - Maf
pfam HRGMv2_2043_9 HRGMv2_2043_9_69 85541 86338 + S6PP | Hydrolase_3
TC HRGMv2_2043_9 HRGMv2_2043_9_70 86565 88358 + 2.A.58.2.2
Gene ID: HRGMv2_2043_9_59
Type: CAZyme
Location: 72594 - 74987 (+)
Gene ID: HRGMv2_2043_9_60
Type: pfam
Location: 75013 - 76428 (+)
Gene ID: HRGMv2_2043_9_61
Type: TC
Location: 76553 - 78349 (+)
Gene ID: HRGMv2_2043_9_62
Type: STP
Location: 78602 - 79915 (+)
Gene ID: HRGMv2_2043_9_63
Type: TC
Location: 79995 - 80891 (+)
Gene ID: HRGMv2_2043_9_64
Type: TC
Location: 80906 - 81763 (+)
Gene ID: HRGMv2_2043_9_65
Type: TF
Location: 81779 - 82627 (+)
Gene ID: HRGMv2_2043_9_66
Type: pfam
Location: 82628 - 83335 (+)
Gene ID: HRGMv2_2043_9_67
Type: CAZyme
Location: 83468 - 84703 (+)
Gene ID: HRGMv2_2043_9_68
Type: pfam
Location: 84794 - 85399 (-)
Gene ID: HRGMv2_2043_9_69
Type: pfam
Location: 85541 - 86338 (+)
Gene ID: HRGMv2_2043_9_70
Type: TC
Location: 86565 - 88358 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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