Cluster: HRGMv2_2043_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2043
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2043_6 | HRGMv2_2043_6_48 | 47115 | 48089 | - | 2.A.19.5.2 |
| TC | HRGMv2_2043_6 | HRGMv2_2043_6_49 | 48211 | 48783 | - | 2.A.107.1.2 |
| pfam | HRGMv2_2043_6 | HRGMv2_2043_6_50 | 49308 | 51083 | - | Big_2 | DUF4886 |
| pfam | HRGMv2_2043_6 | HRGMv2_2043_6_51 | 51489 | 52121 | - | Amidase_2 |
| CAZyme | HRGMv2_2043_6 | HRGMv2_2043_6_52 | 52261 | 53073 | + | CE4 |
| TC | HRGMv2_2043_6 | HRGMv2_2043_6_53 | 53159 | 54790 | - | 2.A.35.2.1 |
Gene ID: HRGMv2_2043_6_48
Type: TC
Location: 47115 - 48089 (-)
Type: TC
Location: 47115 - 48089 (-)
Gene ID: HRGMv2_2043_6_49
Type: TC
Location: 48211 - 48783 (-)
Type: TC
Location: 48211 - 48783 (-)
Gene ID: HRGMv2_2043_6_50
Type: pfam
Location: 49308 - 51083 (-)
Type: pfam
Location: 49308 - 51083 (-)
Gene ID: HRGMv2_2043_6_51
Type: pfam
Location: 51489 - 52121 (-)
Type: pfam
Location: 51489 - 52121 (-)
Gene ID: HRGMv2_2043_6_52
Type: CAZyme
Location: 52261 - 53073 (+)
Type: CAZyme
Location: 52261 - 53073 (+)
Gene ID: HRGMv2_2043_6_53
Type: TC
Location: 53159 - 54790 (-)
Type: TC
Location: 53159 - 54790 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp000434315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.