Cluster: HRGMv2_2043_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2043
- CGC Family ID: CGCFAM_00011
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2043_5 | HRGMv2_2043_5_66 | 70503 | 72686 | + | GT2 |
| pfam | HRGMv2_2043_5 | HRGMv2_2043_5_67 | 72985 | 74670 | - | Glyphos_transf |
| CAZyme | HRGMv2_2043_5 | HRGMv2_2043_5_68 | 74721 | 77180 | - | GT4 |
| pfam | HRGMv2_2043_5 | HRGMv2_2043_5_69 | 77353 | 79398 | + | LRR_5 | LRR_5 | LRR_5 |
| TC | HRGMv2_2043_5 | HRGMv2_2043_5_70 | 79826 | 80626 | + | 3.A.1.103.4 |
| TC | HRGMv2_2043_5 | HRGMv2_2043_5_71 | 80635 | 81384 | + | 3.A.1.103.5 |
Gene ID: HRGMv2_2043_5_66
Type: CAZyme
Location: 70503 - 72686 (+)
Type: CAZyme
Location: 70503 - 72686 (+)
Gene ID: HRGMv2_2043_5_67
Type: pfam
Location: 72985 - 74670 (-)
Type: pfam
Location: 72985 - 74670 (-)
Gene ID: HRGMv2_2043_5_68
Type: CAZyme
Location: 74721 - 77180 (-)
Type: CAZyme
Location: 74721 - 77180 (-)
Gene ID: HRGMv2_2043_5_69
Type: pfam
Location: 77353 - 79398 (+)
Type: pfam
Location: 77353 - 79398 (+)
Gene ID: HRGMv2_2043_5_70
Type: TC
Location: 79826 - 80626 (+)
Type: TC
Location: 79826 - 80626 (+)
Gene ID: HRGMv2_2043_5_71
Type: TC
Location: 80635 - 81384 (+)
Type: TC
Location: 80635 - 81384 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp000434315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.