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Cluster: HRGMv2_2043_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2043_4 HRGMv2_2043_4_55 79417 80754 + 2.A.66.1.7
STP HRGMv2_2043_4 HRGMv2_2043_4_56 81518 82942 + SBP_bac_1
TC HRGMv2_2043_4 HRGMv2_2043_4_57 83115 84038 + 3.A.1.1.20
TC HRGMv2_2043_4 HRGMv2_2043_4_58 84051 84929 + 3.A.1.1.6
CAZyme HRGMv2_2043_4 HRGMv2_2043_4_59 85107 87422 + GH65
CAZyme HRGMv2_2043_4 HRGMv2_2043_4_60 87490 89676 + GH65
TF HRGMv2_2043_4 HRGMv2_2043_4_61 89795 90814 - LacI
pfam HRGMv2_2043_4 HRGMv2_2043_4_62 90925 91569 + Hydrolase | Hydrolase_like | HAD_2
CAZyme HRGMv2_2043_4 HRGMv2_2043_4_63 91563 93167 + GH28
CAZyme HRGMv2_2043_4 HRGMv2_2043_4_64 93178 93798 + CBM32
Gene ID: HRGMv2_2043_4_55
Type: TC
Location: 79417 - 80754 (+)
Gene ID: HRGMv2_2043_4_56
Type: STP
Location: 81518 - 82942 (+)
Gene ID: HRGMv2_2043_4_57
Type: TC
Location: 83115 - 84038 (+)
Gene ID: HRGMv2_2043_4_58
Type: TC
Location: 84051 - 84929 (+)
Gene ID: HRGMv2_2043_4_59
Type: CAZyme
Location: 85107 - 87422 (+)
Gene ID: HRGMv2_2043_4_60
Type: CAZyme
Location: 87490 - 89676 (+)
Gene ID: HRGMv2_2043_4_61
Type: TF
Location: 89795 - 90814 (-)
Gene ID: HRGMv2_2043_4_62
Type: pfam
Location: 90925 - 91569 (+)
Gene ID: HRGMv2_2043_4_63
Type: CAZyme
Location: 91563 - 93167 (+)
Gene ID: HRGMv2_2043_4_64
Type: CAZyme
Location: 93178 - 93798 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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