Cluster: HRGMv2_2043_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2043
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2043_3 | HRGMv2_2043_3_211 | 261242 | 262618 | - | 4.A.2.1.1 |
| TF | HRGMv2_2043_3 | HRGMv2_2043_3_212 | 262804 | 263556 | + | HTH_DeoR |
| pfam | HRGMv2_2043_3 | HRGMv2_2043_3_213 | 263684 | 264058 | - | RibD_C |
| TC | HRGMv2_2043_3 | HRGMv2_2043_3_214 | 264360 | 265223 | - | 8.A.5.1.4 |
| CAZyme | HRGMv2_2043_3 | HRGMv2_2043_3_215 | 265408 | 270717 | - | GH18 | GH18 | GH18 |
Gene ID: HRGMv2_2043_3_211
Type: TC
Location: 261242 - 262618 (-)
Type: TC
Location: 261242 - 262618 (-)
Gene ID: HRGMv2_2043_3_212
Type: TF
Location: 262804 - 263556 (+)
Type: TF
Location: 262804 - 263556 (+)
Gene ID: HRGMv2_2043_3_213
Type: pfam
Location: 263684 - 264058 (-)
Type: pfam
Location: 263684 - 264058 (-)
Gene ID: HRGMv2_2043_3_214
Type: TC
Location: 264360 - 265223 (-)
Type: TC
Location: 264360 - 265223 (-)
Gene ID: HRGMv2_2043_3_215
Type: CAZyme
Location: 265408 - 270717 (-)
Type: CAZyme
Location: 265408 - 270717 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp000434315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.