Cluster: HRGMv2_2043_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: HRGMv2_2043
- CGC Family ID: CGCFAM_00042
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2043_3 | HRGMv2_2043_3_193 | 238435 | 239808 | + | 2.A.22.5.3 |
| STP | HRGMv2_2043_3 | HRGMv2_2043_3_194 | 240251 | 240508 | - | PTS-HPr |
| TC | HRGMv2_2043_3 | HRGMv2_2043_3_195 | 240525 | 240818 | - | 4.A.3.2.6 |
| TC | HRGMv2_2043_3 | HRGMv2_2043_3_196 | 240913 | 242229 | - | 4.A.3.2.6 |
| CAZyme | HRGMv2_2043_3 | HRGMv2_2043_3_197 | 242216 | 243625 | - | GH1 |
| TC | HRGMv2_2043_3 | HRGMv2_2043_3_198 | 243618 | 243938 | - | 4.A.3.1.1 |
Gene ID: HRGMv2_2043_3_193
Type: TC
Location: 238435 - 239808 (+)
Type: TC
Location: 238435 - 239808 (+)
Gene ID: HRGMv2_2043_3_194
Type: STP
Location: 240251 - 240508 (-)
Type: STP
Location: 240251 - 240508 (-)
Gene ID: HRGMv2_2043_3_195
Type: TC
Location: 240525 - 240818 (-)
Type: TC
Location: 240525 - 240818 (-)
Gene ID: HRGMv2_2043_3_196
Type: TC
Location: 240913 - 242229 (-)
Type: TC
Location: 240913 - 242229 (-)
Gene ID: HRGMv2_2043_3_197
Type: CAZyme
Location: 242216 - 243625 (-)
Type: CAZyme
Location: 242216 - 243625 (-)
Gene ID: HRGMv2_2043_3_198
Type: TC
Location: 243618 - 243938 (-)
Type: TC
Location: 243618 - 243938 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G sp000434315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.