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Cluster: HRGMv2_2042_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2042_2 HRGMv2_2042_2_80 106016 106951 + 3.A.1.1.4
TC HRGMv2_2042_2 HRGMv2_2042_2_81 106948 107832 + 3.A.1.1.34
CAZyme HRGMv2_2042_2 HRGMv2_2042_2_82 107877 109916 + GH42
Gene ID: HRGMv2_2042_2_80
Type: TC
Location: 106016 - 106951 (+)
Gene ID: HRGMv2_2042_2_81
Type: TC
Location: 106948 - 107832 (+)
Gene ID: HRGMv2_2042_2_82
Type: CAZyme
Location: 107877 - 109916 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2042_2_82 vegan > omnivore 1.00993 0.02487

🧭 Explore Read Mapping of CGC

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