Cluster: HRGMv2_2042_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2042
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2042_2 | HRGMv2_2042_2_8 | 8192 | 8845 | - | 2.A.115.2.12 |
| CAZyme | HRGMv2_2042_2 | HRGMv2_2042_2_9 | 9708 | 11861 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_2042_2 | HRGMv2_2042_2_10 | 11882 | 12061 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2042_2 | HRGMv2_2042_2_11 | 12634 | 14409 | - | CHASE | GGDEF |
| TC | HRGMv2_2042_2 | HRGMv2_2042_2_12 | 14980 | 15684 | + | 3.A.1.122.14 |
Gene ID: HRGMv2_2042_2_8
Type: TC
Location: 8192 - 8845 (-)
Type: TC
Location: 8192 - 8845 (-)
Gene ID: HRGMv2_2042_2_9
Type: CAZyme
Location: 9708 - 11861 (+)
Type: CAZyme
Location: 9708 - 11861 (+)
Gene ID: HRGMv2_2042_2_10
Type:
Location: 11882 - 12061 (+)
Type:
Location: 11882 - 12061 (+)
Gene ID: HRGMv2_2042_2_11
Type: STP
Location: 12634 - 14409 (-)
Type: STP
Location: 12634 - 14409 (-)
Gene ID: HRGMv2_2042_2_12
Type: TC
Location: 14980 - 15684 (+)
Type: TC
Location: 14980 - 15684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter sp900772675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2042_2_11 | vegan > omnivore | 2.05113 | 0.02487 |