Cluster: HRGMv2_2042_CGC47
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2042
- CGC Family ID: CGCFAM_05925
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2042_94 | HRGMv2_2042_94_1 | 268 | 870 | + | 3.A.1.26.9 |
| CAZyme | HRGMv2_2042_94 | HRGMv2_2042_94_2 | 1053 | 2009 | - | GH43_22 |
| CAZyme | HRGMv2_2042_94 | HRGMv2_2042_94_3 | 2021 | 3520 | - | GH51_1 |
| TF | HRGMv2_2042_94 | HRGMv2_2042_94_4 | 3752 | 4591 | + | HTH_AraC |
| TC | HRGMv2_2042_94 | HRGMv2_2042_94_5 | 4680 | 6002 | + | 2.A.22.5.2 |
Gene ID: HRGMv2_2042_94_1
Type: TC
Location: 268 - 870 (+)
Type: TC
Location: 268 - 870 (+)
Gene ID: HRGMv2_2042_94_2
Type: CAZyme
Location: 1053 - 2009 (-)
Type: CAZyme
Location: 1053 - 2009 (-)
Gene ID: HRGMv2_2042_94_3
Type: CAZyme
Location: 2021 - 3520 (-)
Type: CAZyme
Location: 2021 - 3520 (-)
Gene ID: HRGMv2_2042_94_4
Type: TF
Location: 3752 - 4591 (+)
Type: TF
Location: 3752 - 4591 (+)
Gene ID: HRGMv2_2042_94_5
Type: TC
Location: 4680 - 6002 (+)
Type: TC
Location: 4680 - 6002 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter sp900772675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.