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Cluster: HRGMv2_2042_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2042_29 HRGMv2_2042_29_6 6932 7885 - GT2
pfam HRGMv2_2042_29 HRGMv2_2042_29_7 7908 9104 - LytR_cpsA_psr
TC HRGMv2_2042_29 HRGMv2_2042_29_8 9123 10532 - 9.B.18.1.1
CAZyme HRGMv2_2042_29 HRGMv2_2042_29_9 10700 11674 - GT2
CAZyme HRGMv2_2042_29 HRGMv2_2042_29_10 11662 13506 - GT2 | GT2
peptidase HRGMv2_2042_29 HRGMv2_2042_29_11 13740 15041 + S11.UPW
pfam HRGMv2_2042_29 HRGMv2_2042_29_12 15111 15461 - DUF2304
CAZyme HRGMv2_2042_29 HRGMv2_2042_29_13 15488 16174 - GT2
CAZyme HRGMv2_2042_29 HRGMv2_2042_29_14 16171 16977 - GT2
Gene ID: HRGMv2_2042_29_6
Type: CAZyme
Location: 6932 - 7885 (-)
Gene ID: HRGMv2_2042_29_7
Type: pfam
Location: 7908 - 9104 (-)
Gene ID: HRGMv2_2042_29_8
Type: TC
Location: 9123 - 10532 (-)
Gene ID: HRGMv2_2042_29_9
Type: CAZyme
Location: 10700 - 11674 (-)
Gene ID: HRGMv2_2042_29_10
Type: CAZyme
Location: 11662 - 13506 (-)
Gene ID: HRGMv2_2042_29_11
Type: peptidase
Location: 13740 - 15041 (+)
Gene ID: HRGMv2_2042_29_12
Type: pfam
Location: 15111 - 15461 (-)
Gene ID: HRGMv2_2042_29_13
Type: CAZyme
Location: 15488 - 16174 (-)
Gene ID: HRGMv2_2042_29_14
Type: CAZyme
Location: 16171 - 16977 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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