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Cluster: HRGMv2_2042_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2042_28 HRGMv2_2042_28_9 10982 12337 - 2.A.66.1.33
peptidase HRGMv2_2042_28 HRGMv2_2042_28_10 12628 14133 - S12.UPW
CAZyme HRGMv2_2042_28 HRGMv2_2042_28_11 14160 15527 - GH32
CAZyme HRGMv2_2042_28 HRGMv2_2042_28_12 15679 17076 - GH32
STP HRGMv2_2042_28 HRGMv2_2042_28_13 17298 19100 - SBP_bac_1
TC HRGMv2_2042_28 HRGMv2_2042_28_14 19224 20135 - 3.A.1.1.29
TC HRGMv2_2042_28 HRGMv2_2042_28_15 20155 21096 - 3.A.1.1.10
Gene ID: HRGMv2_2042_28_9
Type: TC
Location: 10982 - 12337 (-)
Gene ID: HRGMv2_2042_28_10
Type: peptidase
Location: 12628 - 14133 (-)
Gene ID: HRGMv2_2042_28_11
Type: CAZyme
Location: 14160 - 15527 (-)
Gene ID: HRGMv2_2042_28_12
Type: CAZyme
Location: 15679 - 17076 (-)
Gene ID: HRGMv2_2042_28_13
Type: STP
Location: 17298 - 19100 (-)
Gene ID: HRGMv2_2042_28_14
Type: TC
Location: 19224 - 20135 (-)
Gene ID: HRGMv2_2042_28_15
Type: TC
Location: 20155 - 21096 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2042_28_9 vegetarian > vegan 1.12339 0.00863

🧭 Explore Read Mapping of CGC

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