Cluster: HRGMv2_2042_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2042
- CGC Family ID: CGCFAM_00026
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2042_23 | HRGMv2_2042_23_35 | 33170 | 34183 | - | GH18 |
| CAZyme | HRGMv2_2042_23 | HRGMv2_2042_23_36 | 34211 | 35500 | - | GH29 |
| STP | HRGMv2_2042_23 | HRGMv2_2042_23_37 | 35692 | 37323 | - | SBP_bac_1 |
| TC | HRGMv2_2042_23 | HRGMv2_2042_23_38 | 37461 | 38390 | - | 3.A.1.1.29 |
| TC | HRGMv2_2042_23 | HRGMv2_2042_23_39 | 38405 | 39340 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2042_23_35
Type: CAZyme
Location: 33170 - 34183 (-)
Type: CAZyme
Location: 33170 - 34183 (-)
Gene ID: HRGMv2_2042_23_36
Type: CAZyme
Location: 34211 - 35500 (-)
Type: CAZyme
Location: 34211 - 35500 (-)
Gene ID: HRGMv2_2042_23_37
Type: STP
Location: 35692 - 37323 (-)
Type: STP
Location: 35692 - 37323 (-)
Gene ID: HRGMv2_2042_23_38
Type: TC
Location: 37461 - 38390 (-)
Type: TC
Location: 37461 - 38390 (-)
Gene ID: HRGMv2_2042_23_39
Type: TC
Location: 38405 - 39340 (-)
Type: TC
Location: 38405 - 39340 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter sp900772675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.