Cluster: HRGMv2_2042_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2042
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2042_21 | HRGMv2_2042_21_21 | 27014 | 27829 | - | CE1 |
| TC | HRGMv2_2042_21 | HRGMv2_2042_21_22 | 27846 | 28742 | - | 3.A.1.1.29 |
| TC | HRGMv2_2042_21 | HRGMv2_2042_21_23 | 28753 | 29676 | - | 3.A.1.1.29 |
Gene ID: HRGMv2_2042_21_21
Type: CAZyme
Location: 27014 - 27829 (-)
Type: CAZyme
Location: 27014 - 27829 (-)
Gene ID: HRGMv2_2042_21_22
Type: TC
Location: 27846 - 28742 (-)
Type: TC
Location: 27846 - 28742 (-)
Gene ID: HRGMv2_2042_21_23
Type: TC
Location: 28753 - 29676 (-)
Type: TC
Location: 28753 - 29676 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter sp900772675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2042_21_22 | vegetarian > omnivore | 1.40703 | 0.02526 |
| HRGMv2_2042_21_23 | vegetarian > omnivore | 1.79926 | 0.02526 |