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Cluster: HRGMv2_2042_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2042_21 HRGMv2_2042_21_5 3909 4232 - 2.A.78.1.1
TC HRGMv2_2042_21 HRGMv2_2042_21_6 4229 4918 - 2.A.78.1.1
pfam HRGMv2_2042_21 HRGMv2_2042_21_7 5047 6741 - PDDEXK_9 | AAA-ATPase_like
pfam HRGMv2_2042_21 HRGMv2_2042_21_8 6809 7327 - VanZ
CAZyme HRGMv2_2042_21 HRGMv2_2042_21_9 7709 8998 - GH125
pfam HRGMv2_2042_21 HRGMv2_2042_21_10 9110 10561 - DUF3502
TC HRGMv2_2042_21 HRGMv2_2042_21_11 10657 11589 - 3.A.1.1.29
TC HRGMv2_2042_21 HRGMv2_2042_21_12 11602 12552 - 3.A.1.1.29
Gene ID: HRGMv2_2042_21_5
Type: TC
Location: 3909 - 4232 (-)
Gene ID: HRGMv2_2042_21_6
Type: TC
Location: 4229 - 4918 (-)
Gene ID: HRGMv2_2042_21_7
Type: pfam
Location: 5047 - 6741 (-)
Gene ID: HRGMv2_2042_21_8
Type: pfam
Location: 6809 - 7327 (-)
Gene ID: HRGMv2_2042_21_9
Type: CAZyme
Location: 7709 - 8998 (-)
Gene ID: HRGMv2_2042_21_10
Type: pfam
Location: 9110 - 10561 (-)
Gene ID: HRGMv2_2042_21_11
Type: TC
Location: 10657 - 11589 (-)
Gene ID: HRGMv2_2042_21_12
Type: TC
Location: 11602 - 12552 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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