Cluster: HRGMv2_2042_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2042
- CGC Family ID: CGCFAM_05816
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2042_8 | HRGMv2_2042_8_31 | 34275 | 35579 | - | GH27 |
| TF | HRGMv2_2042_8 | HRGMv2_2042_8_32 | 35691 | 36548 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2042_8 | HRGMv2_2042_8_33 | 36626 | 37984 | + | 2.A.22.5.3 |
| CAZyme | HRGMv2_2042_8 | HRGMv2_2042_8_34 | 38160 | 40961 | + | GH3 |
Gene ID: HRGMv2_2042_8_31
Type: CAZyme
Location: 34275 - 35579 (-)
Type: CAZyme
Location: 34275 - 35579 (-)
Gene ID: HRGMv2_2042_8_32
Type: TF
Location: 35691 - 36548 (+)
Type: TF
Location: 35691 - 36548 (+)
Gene ID: HRGMv2_2042_8_33
Type: TC
Location: 36626 - 37984 (+)
Type: TC
Location: 36626 - 37984 (+)
Gene ID: HRGMv2_2042_8_34
Type: CAZyme
Location: 38160 - 40961 (+)
Type: CAZyme
Location: 38160 - 40961 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter sp900772675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2042_8_31 | vegan > omnivore | 1.51482 | 0.02487 |
| HRGMv2_2042_8_31 | vegetarian > omnivore | 2.00990 | 0.00455 |