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Cluster: HRGMv2_2042_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2042_6 HRGMv2_2042_6_31 26512 27981 - 4.A.1.1.7
TC HRGMv2_2042_6 HRGMv2_2042_6_32 28235 28714 - 4.A.1.1.6
TF HRGMv2_2042_6 HRGMv2_2042_6_33 29350 30351 - HTH_AraC
TC HRGMv2_2042_6 HRGMv2_2042_6_34 30693 31628 + 3.A.1.1.29
TC HRGMv2_2042_6 HRGMv2_2042_6_35 31641 32504 + 3.A.1.1.29
TC HRGMv2_2042_6 HRGMv2_2042_6_36 32607 34316 + 3.A.1.1.29
CAZyme HRGMv2_2042_6 HRGMv2_2042_6_37 34512 37475 + GH3
TC HRGMv2_2042_6 HRGMv2_2042_6_38 37895 38536 + 2.A.87.1.4
NULL(UNKNOWN) HRGMv2_2042_6 HRGMv2_2042_6_39 38798 39055 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2042_6 HRGMv2_2042_6_40 39082 39690 + NUDIX
TC HRGMv2_2042_6 HRGMv2_2042_6_41 39877 41712 - 3.A.1.111.2
TC HRGMv2_2042_6 HRGMv2_2042_6_42 41712 43514 - 3.A.1.111.2
Gene ID: HRGMv2_2042_6_31
Type: TC
Location: 26512 - 27981 (-)
Gene ID: HRGMv2_2042_6_32
Type: TC
Location: 28235 - 28714 (-)
Gene ID: HRGMv2_2042_6_33
Type: TF
Location: 29350 - 30351 (-)
Gene ID: HRGMv2_2042_6_34
Type: TC
Location: 30693 - 31628 (+)
Gene ID: HRGMv2_2042_6_35
Type: TC
Location: 31641 - 32504 (+)
Gene ID: HRGMv2_2042_6_36
Type: TC
Location: 32607 - 34316 (+)
Gene ID: HRGMv2_2042_6_37
Type: CAZyme
Location: 34512 - 37475 (+)
Gene ID: HRGMv2_2042_6_38
Type: TC
Location: 37895 - 38536 (+)
Gene ID: HRGMv2_2042_6_39
Type:
Location: 38798 - 39055 (+)
Gene ID: HRGMv2_2042_6_40
Type: STP
Location: 39082 - 39690 (+)
Gene ID: HRGMv2_2042_6_41
Type: TC
Location: 39877 - 41712 (-)
Gene ID: HRGMv2_2042_6_42
Type: TC
Location: 41712 - 43514 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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