Cluster: HRGMv2_2042_CGC13
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2042
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2042_5 | HRGMv2_2042_5_39 | 42336 | 43724 | - | 2.A.66.1.28 |
| NULL(UNKNOWN) | HRGMv2_2042_5 | HRGMv2_2042_5_40 | 43880 | 44071 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2042_5 | HRGMv2_2042_5_41 | 44123 | 45778 | - | GH123 |
| NULL(UNKNOWN) | HRGMv2_2042_5 | HRGMv2_2042_5_42 | 46014 | 46358 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2042_5 | HRGMv2_2042_5_43 | 46369 | 46758 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2042_5 | HRGMv2_2042_5_44 | 46755 | 47327 | - | 2.A.51.1.6 |
| TC | HRGMv2_2042_5 | HRGMv2_2042_5_45 | 47324 | 47890 | - | 2.A.51.1.6 |
| sulfatase | HRGMv2_2042_5 | HRGMv2_2042_5_46 | 47989 | 49476 | - | S1_43 |
| pfam | HRGMv2_2042_5 | HRGMv2_2042_5_47 | 49480 | 50598 | - | Radical_SAM | SPASM |
| CAZyme | HRGMv2_2042_5 | HRGMv2_2042_5_48 | 50665 | 53742 | - | GH2 |
| TF | HRGMv2_2042_5 | HRGMv2_2042_5_49 | 54005 | 54886 | + | HTH_AraC |
| pfam | HRGMv2_2042_5 | HRGMv2_2042_5_50 | 55032 | 55322 | - | NanE |
| CAZyme | HRGMv2_2042_5 | HRGMv2_2042_5_51 | 55306 | 56436 | - | GH33 |
| pfam | HRGMv2_2042_5 | HRGMv2_2042_5_52 | 56569 | 58122 | - | DUF3502 |
| TC | HRGMv2_2042_5 | HRGMv2_2042_5_53 | 58203 | 59126 | - | 3.A.1.1.29 |
| TC | HRGMv2_2042_5 | HRGMv2_2042_5_54 | 59148 | 60053 | - | 3.A.1.1.9 |
| TF | HRGMv2_2042_5 | HRGMv2_2042_5_55 | 60109 | 61140 | - | LacI |
| TC | HRGMv2_2042_5 | HRGMv2_2042_5_56 | 61542 | 62894 | - | 2.A.2.3.2 |
Gene ID: HRGMv2_2042_5_39
Type: TC
Location: 42336 - 43724 (-)
Type: TC
Location: 42336 - 43724 (-)
Gene ID: HRGMv2_2042_5_40
Type:
Location: 43880 - 44071 (-)
Type:
Location: 43880 - 44071 (-)
Gene ID: HRGMv2_2042_5_41
Type: CAZyme
Location: 44123 - 45778 (-)
Type: CAZyme
Location: 44123 - 45778 (-)
Gene ID: HRGMv2_2042_5_42
Type:
Location: 46014 - 46358 (-)
Type:
Location: 46014 - 46358 (-)
Gene ID: HRGMv2_2042_5_43
Type:
Location: 46369 - 46758 (-)
Type:
Location: 46369 - 46758 (-)
Gene ID: HRGMv2_2042_5_44
Type: TC
Location: 46755 - 47327 (-)
Type: TC
Location: 46755 - 47327 (-)
Gene ID: HRGMv2_2042_5_45
Type: TC
Location: 47324 - 47890 (-)
Type: TC
Location: 47324 - 47890 (-)
Gene ID: HRGMv2_2042_5_46
Type: sulfatase
Location: 47989 - 49476 (-)
Type: sulfatase
Location: 47989 - 49476 (-)
Gene ID: HRGMv2_2042_5_47
Type: pfam
Location: 49480 - 50598 (-)
Type: pfam
Location: 49480 - 50598 (-)
Gene ID: HRGMv2_2042_5_48
Type: CAZyme
Location: 50665 - 53742 (-)
Type: CAZyme
Location: 50665 - 53742 (-)
Gene ID: HRGMv2_2042_5_49
Type: TF
Location: 54005 - 54886 (+)
Type: TF
Location: 54005 - 54886 (+)
Gene ID: HRGMv2_2042_5_50
Type: pfam
Location: 55032 - 55322 (-)
Type: pfam
Location: 55032 - 55322 (-)
Gene ID: HRGMv2_2042_5_51
Type: CAZyme
Location: 55306 - 56436 (-)
Type: CAZyme
Location: 55306 - 56436 (-)
Gene ID: HRGMv2_2042_5_52
Type: pfam
Location: 56569 - 58122 (-)
Type: pfam
Location: 56569 - 58122 (-)
Gene ID: HRGMv2_2042_5_53
Type: TC
Location: 58203 - 59126 (-)
Type: TC
Location: 58203 - 59126 (-)
Gene ID: HRGMv2_2042_5_54
Type: TC
Location: 59148 - 60053 (-)
Type: TC
Location: 59148 - 60053 (-)
Gene ID: HRGMv2_2042_5_55
Type: TF
Location: 60109 - 61140 (-)
Type: TF
Location: 60109 - 61140 (-)
Gene ID: HRGMv2_2042_5_56
Type: TC
Location: 61542 - 62894 (-)
Type: TC
Location: 61542 - 62894 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fusicatenibacter
Species
Fusicatenibacter sp900772675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.