dbCAN HGM

Cluster: HRGMv2_2040_CGC6

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2040_7	HRGMv2_2040_7_29	34917	35246	-	2.A.78.1.1
TC	HRGMv2_2040_7	HRGMv2_2040_7_30	35243	35770	-	2.A.78.1.1
STP	HRGMv2_2040_7	HRGMv2_2040_7_31	35839	36300	-	NUDIX
pfam	HRGMv2_2040_7	HRGMv2_2040_7_32	36338	37339	-	Amidase_3
CAZyme	HRGMv2_2040_7	HRGMv2_2040_7_33	37344	39836	-	GH95
STP	HRGMv2_2040_7	HRGMv2_2040_7_34	39840	40952	-	GGDEF
NULL(UNKNOWN)	HRGMv2_2040_7	HRGMv2_2040_7_35	40976	41377	-	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2040_7	HRGMv2_2040_7_36	41656	43833	+	3.A.10.1.4

Gene ID: HRGMv2_2040_7_29
Type: TC
Location: 34917 - 35246 (-)

Gene ID: HRGMv2_2040_7_30
Type: TC
Location: 35243 - 35770 (-)

Gene ID: HRGMv2_2040_7_31
Type: STP
Location: 35839 - 36300 (-)

Gene ID: HRGMv2_2040_7_32
Type: pfam
Location: 36338 - 37339 (-)

Gene ID: HRGMv2_2040_7_33
Type: CAZyme
Location: 37344 - 39836 (-)

Gene ID: HRGMv2_2040_7_34
Type: STP
Location: 39840 - 40952 (-)

Gene ID: HRGMv2_2040_7_35
Type:
Location: 40976 - 41377 (-)

Gene ID: HRGMv2_2040_7_36
Type: TC
Location: 41656 - 43833 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2040_7_31	vegetarian > vegan	1.09439	0.04476

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2040_7_29	flexitarian > omnivore	5.24521	0.01835
HRGMv2_2040_7_29	vegan > omnivore	3.99508	0.00880
HRGMv2_2040_7_30	flexitarian > omnivore	4.11236	0.04665
HRGMv2_2040_7_35	flexitarian > omnivore	1.54747	0.01509

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2040_7_33	UC > CD	1.30746	0.00148
HRGMv2_2040_7_33	nonIBD > CD	1.00988	0.01095
HRGMv2_2040_7_35	UC > CD	1.22953	0.00148