Cluster: HRGMv2_2040_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2040
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2040_20 | HRGMv2_2040_20_37 | 39427 | 40854 | + | GH179 |
| NULL(UNKNOWN) | HRGMv2_2040_20 | HRGMv2_2040_20_38 | 40865 | 41194 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2040_20 | HRGMv2_2040_20_39 | 41681 | 42907 | + | 8.A.59.4.2 |
Gene ID: HRGMv2_2040_20_37
Type: CAZyme
Location: 39427 - 40854 (+)
Type: CAZyme
Location: 39427 - 40854 (+)
Gene ID: HRGMv2_2040_20_38
Type:
Location: 40865 - 41194 (+)
Type:
Location: 40865 - 41194 (+)
Gene ID: HRGMv2_2040_20_39
Type: TC
Location: 41681 - 42907 (+)
Type: TC
Location: 41681 - 42907 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.