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Cluster: HRGMv2_2040_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2040_15 HRGMv2_2040_15_17 16879 17577 + 3.A.1.134.7
pfam HRGMv2_2040_15 HRGMv2_2040_15_18 17624 19840 + FtsX | FtsX
CAZyme HRGMv2_2040_15 HRGMv2_2040_15_19 20083 21621 + PL9
TC HRGMv2_2040_15 HRGMv2_2040_15_20 21747 23096 - 2.A.66.1.23
NULL(UNKNOWN) HRGMv2_2040_15 HRGMv2_2040_15_21 23678 24991 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2040_15 HRGMv2_2040_15_22 25024 26379 + 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_2040_15 HRGMv2_2040_15_23 26418 26942 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2040_15 HRGMv2_2040_15_24 27072 27899 + DegV
TC HRGMv2_2040_15 HRGMv2_2040_15_25 28010 28240 + 3.D.1.6.3
Gene ID: HRGMv2_2040_15_17
Type: TC
Location: 16879 - 17577 (+)
Gene ID: HRGMv2_2040_15_18
Type: pfam
Location: 17624 - 19840 (+)
Gene ID: HRGMv2_2040_15_19
Type: CAZyme
Location: 20083 - 21621 (+)
Gene ID: HRGMv2_2040_15_20
Type: TC
Location: 21747 - 23096 (-)
Gene ID: HRGMv2_2040_15_21
Type:
Location: 23678 - 24991 (+)
Gene ID: HRGMv2_2040_15_22
Type: TC
Location: 25024 - 26379 (+)
Gene ID: HRGMv2_2040_15_23
Type:
Location: 26418 - 26942 (-)
Gene ID: HRGMv2_2040_15_24
Type: pfam
Location: 27072 - 27899 (+)
Gene ID: HRGMv2_2040_15_25
Type: TC
Location: 28010 - 28240 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Lachnospira
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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