Cluster: HRGMv2_2040_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2040
- CGC Family ID: CGCFAM_03970
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2040_13 | HRGMv2_2040_13_3 | 3318 | 8516 | - | PL9_1 |
| pfam | HRGMv2_2040_13 | HRGMv2_2040_13_4 | 8961 | 9851 | - | Transposase_31 |
| NULL(UNKNOWN) | HRGMv2_2040_13 | HRGMv2_2040_13_5 | 10422 | 11495 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2040_13 | HRGMv2_2040_13_6 | 11514 | 13103 | - | 2.A.50.2.1 |
Gene ID: HRGMv2_2040_13_3
Type: CAZyme
Location: 3318 - 8516 (-)
Type: CAZyme
Location: 3318 - 8516 (-)
Gene ID: HRGMv2_2040_13_4
Type: pfam
Location: 8961 - 9851 (-)
Type: pfam
Location: 8961 - 9851 (-)
Gene ID: HRGMv2_2040_13_5
Type:
Location: 10422 - 11495 (-)
Type:
Location: 10422 - 11495 (-)
Gene ID: HRGMv2_2040_13_6
Type: TC
Location: 11514 - 13103 (-)
Type: TC
Location: 11514 - 13103 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.