Cluster: HRGMv2_2033_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2033
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2033_4 | HRGMv2_2033_4_17 | 15055 | 16761 | + | 2.A.114.1.3 |
| TC | HRGMv2_2033_4 | HRGMv2_2033_4_18 | 16991 | 18286 | + | 2.A.49.9.2 |
| CAZyme | HRGMv2_2033_4 | HRGMv2_2033_4_19 | 18519 | 25868 | + | CBM32 | CBM32 | CBM32 | CBM32 | CBM6 | CBM6 |
| NULL(UNKNOWN) | HRGMv2_2033_4 | HRGMv2_2033_4_20 | 25889 | 26077 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2033_4 | HRGMv2_2033_4_21 | 26114 | 28888 | + | GH5_54 |
| CAZyme | HRGMv2_2033_4 | HRGMv2_2033_4_22 | 28912 | 31575 | + | CBM92 | GH5_54 |
Gene ID: HRGMv2_2033_4_17
Type: TC
Location: 15055 - 16761 (+)
Type: TC
Location: 15055 - 16761 (+)
Gene ID: HRGMv2_2033_4_18
Type: TC
Location: 16991 - 18286 (+)
Type: TC
Location: 16991 - 18286 (+)
Gene ID: HRGMv2_2033_4_19
Type: CAZyme
Location: 18519 - 25868 (+)
Type: CAZyme
Location: 18519 - 25868 (+)
Gene ID: HRGMv2_2033_4_20
Type:
Location: 25889 - 26077 (+)
Type:
Location: 25889 - 26077 (+)
Gene ID: HRGMv2_2033_4_21
Type: CAZyme
Location: 26114 - 28888 (+)
Type: CAZyme
Location: 26114 - 28888 (+)
Gene ID: HRGMv2_2033_4_22
Type: CAZyme
Location: 28912 - 31575 (+)
Type: CAZyme
Location: 28912 - 31575 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G segne
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.