Cluster: HRGMv2_2033_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2033
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2033_4 | HRGMv2_2033_4_1 | 3 | 482 | + | 3.A.1.1.45 |
| CAZyme | HRGMv2_2033_4 | HRGMv2_2033_4_2 | 507 | 1997 | + | GH77 |
| TF | HRGMv2_2033_4 | HRGMv2_2033_4_3 | 2122 | 3150 | + | LacI |
| TC | HRGMv2_2033_4 | HRGMv2_2033_4_4 | 3165 | 3779 | + | 9.B.28.1.2 |
Gene ID: HRGMv2_2033_4_1
Type: TC
Location: 3 - 482 (+)
Type: TC
Location: 3 - 482 (+)
Gene ID: HRGMv2_2033_4_2
Type: CAZyme
Location: 507 - 1997 (+)
Type: CAZyme
Location: 507 - 1997 (+)
Gene ID: HRGMv2_2033_4_3
Type: TF
Location: 2122 - 3150 (+)
Type: TF
Location: 2122 - 3150 (+)
Gene ID: HRGMv2_2033_4_4
Type: TC
Location: 3165 - 3779 (+)
Type: TC
Location: 3165 - 3779 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G segne
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.