Cluster: HRGMv2_2033_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2033
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2033_18 | HRGMv2_2033_18_13 | 17378 | 18256 | + | 3.A.1.1.20 |
| TC | HRGMv2_2033_18 | HRGMv2_2033_18_14 | 18261 | 19088 | + | 3.A.1.1.18 |
| CAZyme | HRGMv2_2033_18 | HRGMv2_2033_18_15 | 19104 | 20450 | + | GH172 |
| CAZyme | HRGMv2_2033_18 | HRGMv2_2033_18_16 | 20562 | 22046 | + | GH32 |
Gene ID: HRGMv2_2033_18_13
Type: TC
Location: 17378 - 18256 (+)
Type: TC
Location: 17378 - 18256 (+)
Gene ID: HRGMv2_2033_18_14
Type: TC
Location: 18261 - 19088 (+)
Type: TC
Location: 18261 - 19088 (+)
Gene ID: HRGMv2_2033_18_15
Type: CAZyme
Location: 19104 - 20450 (+)
Type: CAZyme
Location: 19104 - 20450 (+)
Gene ID: HRGMv2_2033_18_16
Type: CAZyme
Location: 20562 - 22046 (+)
Type: CAZyme
Location: 20562 - 22046 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G segne
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.