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Cluster: HRGMv2_2033_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2033_2 HRGMv2_2033_2_411 470090 471517 - 2.A.50.2.1
pfam HRGMv2_2033_2 HRGMv2_2033_2_412 471532 472368 - Choline_bind_3
pfam HRGMv2_2033_2 HRGMv2_2033_2_413 472491 473231 - PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_2033_2 HRGMv2_2033_2_414 473245 474051 - 3.A.1.25.4
TC HRGMv2_2033_2 HRGMv2_2033_2_415 474057 474905 - 3.A.1.26.7
TC HRGMv2_2033_2 HRGMv2_2033_2_416 474907 475758 - 3.A.1.26.7
pfam HRGMv2_2033_2 HRGMv2_2033_2_417 475897 477771 + Sulfatase
CAZyme HRGMv2_2033_2 HRGMv2_2033_2_418 477830 479311 - GT2
Gene ID: HRGMv2_2033_2_411
Type: TC
Location: 470090 - 471517 (-)
Gene ID: HRGMv2_2033_2_412
Type: pfam
Location: 471532 - 472368 (-)
Gene ID: HRGMv2_2033_2_413
Type: pfam
Location: 472491 - 473231 (-)
Gene ID: HRGMv2_2033_2_414
Type: TC
Location: 473245 - 474051 (-)
Gene ID: HRGMv2_2033_2_415
Type: TC
Location: 474057 - 474905 (-)
Gene ID: HRGMv2_2033_2_416
Type: TC
Location: 474907 - 475758 (-)
Gene ID: HRGMv2_2033_2_417
Type: pfam
Location: 475897 - 477771 (+)
Gene ID: HRGMv2_2033_2_418
Type: CAZyme
Location: 477830 - 479311 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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