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Cluster: HRGMv2_2033_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2033_16 HRGMv2_2033_16_64 70798 72009 - GT4
NULL(UNKNOWN) HRGMv2_2033_16 HRGMv2_2033_16_65 72011 73375 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2033_16 HRGMv2_2033_16_66 73382 74152 - GT32
CAZyme HRGMv2_2033_16 HRGMv2_2033_16_67 74153 75502 - GT4
CAZyme HRGMv2_2033_16 HRGMv2_2033_16_68 75539 76738 - GT4
TC HRGMv2_2033_16 HRGMv2_2033_16_69 76774 78219 - 9.B.18.1.2
NULL(UNKNOWN) HRGMv2_2033_16 HRGMv2_2033_16_70 78444 78854 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2033_16 HRGMv2_2033_16_71 78856 79686 + 1.E.12.1.3
Gene ID: HRGMv2_2033_16_64
Type: CAZyme
Location: 70798 - 72009 (-)
Gene ID: HRGMv2_2033_16_65
Type:
Location: 72011 - 73375 (-)
Gene ID: HRGMv2_2033_16_66
Type: CAZyme
Location: 73382 - 74152 (-)
Gene ID: HRGMv2_2033_16_67
Type: CAZyme
Location: 74153 - 75502 (-)
Gene ID: HRGMv2_2033_16_68
Type: CAZyme
Location: 75539 - 76738 (-)
Gene ID: HRGMv2_2033_16_69
Type: TC
Location: 76774 - 78219 (-)
Gene ID: HRGMv2_2033_16_70
Type:
Location: 78444 - 78854 (+)
Gene ID: HRGMv2_2033_16_71
Type: TC
Location: 78856 - 79686 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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