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Cluster: HRGMv2_2033_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2033_15 HRGMv2_2033_15_81 118071 121250 - GH161
TF HRGMv2_2033_15 HRGMv2_2033_15_82 121280 122281 - LacI
CAZyme HRGMv2_2033_15 HRGMv2_2033_15_83 122367 123740 - GH16_3
TC HRGMv2_2033_15 HRGMv2_2033_15_84 123813 124769 - 3.A.1.1.47
TC HRGMv2_2033_15 HRGMv2_2033_15_85 124759 125835 - 3.A.1.1.48
pfam HRGMv2_2033_15 HRGMv2_2033_15_86 125835 128351 - DUF5696
pfam HRGMv2_2033_15 HRGMv2_2033_15_87 128335 130401 - Yip1 | SGL
TC HRGMv2_2033_15 HRGMv2_2033_15_88 130414 131283 - 3.A.1.1.39
TC HRGMv2_2033_15 HRGMv2_2033_15_89 131300 132247 - 3.A.1.1.23
Gene ID: HRGMv2_2033_15_81
Type: CAZyme
Location: 118071 - 121250 (-)
Gene ID: HRGMv2_2033_15_82
Type: TF
Location: 121280 - 122281 (-)
Gene ID: HRGMv2_2033_15_83
Type: CAZyme
Location: 122367 - 123740 (-)
Gene ID: HRGMv2_2033_15_84
Type: TC
Location: 123813 - 124769 (-)
Gene ID: HRGMv2_2033_15_85
Type: TC
Location: 124759 - 125835 (-)
Gene ID: HRGMv2_2033_15_86
Type: pfam
Location: 125835 - 128351 (-)
Gene ID: HRGMv2_2033_15_87
Type: pfam
Location: 128335 - 130401 (-)
Gene ID: HRGMv2_2033_15_88
Type: TC
Location: 130414 - 131283 (-)
Gene ID: HRGMv2_2033_15_89
Type: TC
Location: 131300 - 132247 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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