Cluster: HRGMv2_2033_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2033
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2033_13 | HRGMv2_2033_13_469 | 534348 | 535556 | - | GH16_3 |
| pfam | HRGMv2_2033_13 | HRGMv2_2033_13_470 | 535797 | 536786 | - | 2-Hacid_dh | 2-Hacid_dh_C |
| TC | HRGMv2_2033_13 | HRGMv2_2033_13_471 | 536908 | 537570 | - | 3.A.2.2.2 |
| TC | HRGMv2_2033_13 | HRGMv2_2033_13_472 | 537610 | 538983 | - | 3.A.2.2.2 |
| TC | HRGMv2_2033_13 | HRGMv2_2033_13_473 | 538985 | 540757 | - | 3.A.2.3.2 |
Gene ID: HRGMv2_2033_13_469
Type: CAZyme
Location: 534348 - 535556 (-)
Type: CAZyme
Location: 534348 - 535556 (-)
Gene ID: HRGMv2_2033_13_470
Type: pfam
Location: 535797 - 536786 (-)
Type: pfam
Location: 535797 - 536786 (-)
Gene ID: HRGMv2_2033_13_471
Type: TC
Location: 536908 - 537570 (-)
Type: TC
Location: 536908 - 537570 (-)
Gene ID: HRGMv2_2033_13_472
Type: TC
Location: 537610 - 538983 (-)
Type: TC
Location: 537610 - 538983 (-)
Gene ID: HRGMv2_2033_13_473
Type: TC
Location: 538985 - 540757 (-)
Type: TC
Location: 538985 - 540757 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G segne
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.