Cluster: HRGMv2_2033_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2033
- CGC Family ID: CGCFAM_03547
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2033_13 | HRGMv2_2033_13_397 | 440192 | 442102 | - | CBM13 | CBM56 | GH16_3 |
| pfam | HRGMv2_2033_13 | HRGMv2_2033_13_398 | 442246 | 443013 | - | TraX |
| CAZyme | HRGMv2_2033_13 | HRGMv2_2033_13_399 | 443027 | 444871 | - | GH13_11 |
| TC | HRGMv2_2033_13 | HRGMv2_2033_13_400 | 445051 | 446685 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_2033_13_397
Type: CAZyme
Location: 440192 - 442102 (-)
Type: CAZyme
Location: 440192 - 442102 (-)
Gene ID: HRGMv2_2033_13_398
Type: pfam
Location: 442246 - 443013 (-)
Type: pfam
Location: 442246 - 443013 (-)
Gene ID: HRGMv2_2033_13_399
Type: CAZyme
Location: 443027 - 444871 (-)
Type: CAZyme
Location: 443027 - 444871 (-)
Gene ID: HRGMv2_2033_13_400
Type: TC
Location: 445051 - 446685 (+)
Type: TC
Location: 445051 - 446685 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eubacterium_G
Species
Eubacterium_G segne
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2033_13_400 | vegetarian > vegan | 1.08059 | 0.00181 |