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Cluster: HRGMv2_2033_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2033_12 HRGMv2_2033_12_22 30817 31938 - CE9
sulfatase HRGMv2_2033_12 HRGMv2_2033_12_23 31953 32690 - S1_9
TF HRGMv2_2033_12 HRGMv2_2033_12_24 32713 33552 - HTH_AraC
TC HRGMv2_2033_12 HRGMv2_2033_12_25 33612 34481 - 3.A.1.1.45
TC HRGMv2_2033_12 HRGMv2_2033_12_26 34491 35387 - 3.A.1.1.23
STP HRGMv2_2033_12 HRGMv2_2033_12_27 35489 36787 - SBP_bac_1
TC HRGMv2_2033_12 HRGMv2_2033_12_28 37032 38867 - 8.A.59.2.1
pfam HRGMv2_2033_12 HRGMv2_2033_12_29 38899 40314 - PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme HRGMv2_2033_12 HRGMv2_2033_12_30 40339 42732 - GH94
Gene ID: HRGMv2_2033_12_22
Type: CAZyme
Location: 30817 - 31938 (-)
Gene ID: HRGMv2_2033_12_23
Type: sulfatase
Location: 31953 - 32690 (-)
Gene ID: HRGMv2_2033_12_24
Type: TF
Location: 32713 - 33552 (-)
Gene ID: HRGMv2_2033_12_25
Type: TC
Location: 33612 - 34481 (-)
Gene ID: HRGMv2_2033_12_26
Type: TC
Location: 34491 - 35387 (-)
Gene ID: HRGMv2_2033_12_27
Type: STP
Location: 35489 - 36787 (-)
Gene ID: HRGMv2_2033_12_28
Type: TC
Location: 37032 - 38867 (-)
Gene ID: HRGMv2_2033_12_29
Type: pfam
Location: 38899 - 40314 (-)
Gene ID: HRGMv2_2033_12_30
Type: CAZyme
Location: 40339 - 42732 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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