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Cluster: HRGMv2_2033_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2033_8 HRGMv2_2033_8_99 76351 77469 + 3.A.1.1.26
NULL(UNKNOWN) HRGMv2_2033_8 HRGMv2_2033_8_100 77608 77820 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2033_8 HRGMv2_2033_8_101 78027 80207 + CBM32 | GH128
pfam HRGMv2_2033_8 HRGMv2_2033_8_102 80501 81589 + HTH_30 | GGDEF_2
TC HRGMv2_2033_8 HRGMv2_2033_8_103 81735 82406 + 3.A.1.140.1
pfam HRGMv2_2033_8 HRGMv2_2033_8_104 82407 83315 + FtsX | FtsX_ECD
STP HRGMv2_2033_8 HRGMv2_2033_8_105 83327 84562 + Peptidase_M23
TC HRGMv2_2033_8 HRGMv2_2033_8_106 84646 85773 + 9.B.174.1.2
TC HRGMv2_2033_8 HRGMv2_2033_8_107 85790 86383 + 9.B.28.1.8
Gene ID: HRGMv2_2033_8_99
Type: TC
Location: 76351 - 77469 (+)
Gene ID: HRGMv2_2033_8_100
Type:
Location: 77608 - 77820 (+)
Gene ID: HRGMv2_2033_8_101
Type: CAZyme
Location: 78027 - 80207 (+)
Gene ID: HRGMv2_2033_8_102
Type: pfam
Location: 80501 - 81589 (+)
Gene ID: HRGMv2_2033_8_103
Type: TC
Location: 81735 - 82406 (+)
Gene ID: HRGMv2_2033_8_104
Type: pfam
Location: 82407 - 83315 (+)
Gene ID: HRGMv2_2033_8_105
Type: STP
Location: 83327 - 84562 (+)
Gene ID: HRGMv2_2033_8_106
Type: TC
Location: 84646 - 85773 (+)
Gene ID: HRGMv2_2033_8_107
Type: TC
Location: 85790 - 86383 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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