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Cluster: HRGMv2_2033_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2033_2 HRGMv2_2033_2_81 84901 85746 - 9.B.70.1.1
CAZyme HRGMv2_2033_2 HRGMv2_2033_2_82 85858 87180 + CE4
TC HRGMv2_2033_2 HRGMv2_2033_2_83 87244 87996 - 3.A.1.3.4
TC HRGMv2_2033_2 HRGMv2_2033_2_84 87983 88753 - 3.A.1.3.20
TC HRGMv2_2033_2 HRGMv2_2033_2_85 88810 89595 - 3.A.1.3.27
pfam HRGMv2_2033_2 HRGMv2_2033_2_86 89716 90693 - WYL
pfam HRGMv2_2033_2 HRGMv2_2033_2_87 90824 91303 - SPOUT_MTase
TC HRGMv2_2033_2 HRGMv2_2033_2_88 91315 92100 - 3.A.1.3.14
TC HRGMv2_2033_2 HRGMv2_2033_2_89 92115 92768 - 3.A.1.3.14
TC HRGMv2_2033_2 HRGMv2_2033_2_90 92858 93661 - 3.A.1.3.10
Gene ID: HRGMv2_2033_2_81
Type: TC
Location: 84901 - 85746 (-)
Gene ID: HRGMv2_2033_2_82
Type: CAZyme
Location: 85858 - 87180 (+)
Gene ID: HRGMv2_2033_2_83
Type: TC
Location: 87244 - 87996 (-)
Gene ID: HRGMv2_2033_2_84
Type: TC
Location: 87983 - 88753 (-)
Gene ID: HRGMv2_2033_2_85
Type: TC
Location: 88810 - 89595 (-)
Gene ID: HRGMv2_2033_2_86
Type: pfam
Location: 89716 - 90693 (-)
Gene ID: HRGMv2_2033_2_87
Type: pfam
Location: 90824 - 91303 (-)
Gene ID: HRGMv2_2033_2_88
Type: TC
Location: 91315 - 92100 (-)
Gene ID: HRGMv2_2033_2_89
Type: TC
Location: 92115 - 92768 (-)
Gene ID: HRGMv2_2033_2_90
Type: TC
Location: 92858 - 93661 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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