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Cluster: HRGMv2_2031_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2031_66 HRGMv2_2031_66_1 3 1151 - 4.A.3.2.8
TC HRGMv2_2031_66 HRGMv2_2031_66_2 1180 1482 - 4.A.3.2.8
TC HRGMv2_2031_66 HRGMv2_2031_66_3 1501 1815 - 4.A.3.2.2
CAZyme HRGMv2_2031_66 HRGMv2_2031_66_4 1828 3258 - GH1
TF HRGMv2_2031_66 HRGMv2_2031_66_5 3454 4236 - HTH_6
TC HRGMv2_2031_66 HRGMv2_2031_66_6 4432 6600 - 3.A.7.7.1
pfam HRGMv2_2031_66 HRGMv2_2031_66_7 6735 7337 + Peptidase_C39_2
NULL(UNKNOWN) HRGMv2_2031_66 HRGMv2_2031_66_8 7342 7506 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2031_66 HRGMv2_2031_66_9 7640 8554 + 2.A.4.7.9
Gene ID: HRGMv2_2031_66_1
Type: TC
Location: 3 - 1151 (-)
Gene ID: HRGMv2_2031_66_2
Type: TC
Location: 1180 - 1482 (-)
Gene ID: HRGMv2_2031_66_3
Type: TC
Location: 1501 - 1815 (-)
Gene ID: HRGMv2_2031_66_4
Type: CAZyme
Location: 1828 - 3258 (-)
Gene ID: HRGMv2_2031_66_5
Type: TF
Location: 3454 - 4236 (-)
Gene ID: HRGMv2_2031_66_6
Type: TC
Location: 4432 - 6600 (-)
Gene ID: HRGMv2_2031_66_7
Type: pfam
Location: 6735 - 7337 (+)
Gene ID: HRGMv2_2031_66_8
Type:
Location: 7342 - 7506 (-)
Gene ID: HRGMv2_2031_66_9
Type: TC
Location: 7640 - 8554 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
MOL361
→
Family
Turicibacteraceae
→
Genus
Turicibacter
→
Species
Turicibacter bilis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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