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Cluster: HRGMv2_2031_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2031_3 HRGMv2_2031_3_41 47978 50113 + CBM68 | GH13_14
NULL(UNKNOWN) HRGMv2_2031_3 HRGMv2_2031_3_42 50155 50625 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2031_3 HRGMv2_2031_3_43 50700 51545 - Epimerase | RmlD_sub_bind
TC HRGMv2_2031_3 HRGMv2_2031_3_44 51542 52567 - 9.B.18.2.1
CAZyme HRGMv2_2031_3 HRGMv2_2031_3_45 52854 53855 - GT113
CAZyme HRGMv2_2031_3 HRGMv2_2031_3_46 54463 56898 - GT113 | GT2
CAZyme HRGMv2_2031_3 HRGMv2_2031_3_47 56850 59552 - GT4 | GT4
TC HRGMv2_2031_3 HRGMv2_2031_3_48 59674 60852 - 2.A.66.1.22
Gene ID: HRGMv2_2031_3_41
Type: CAZyme
Location: 47978 - 50113 (+)
Gene ID: HRGMv2_2031_3_42
Type:
Location: 50155 - 50625 (-)
Gene ID: HRGMv2_2031_3_43
Type: pfam
Location: 50700 - 51545 (-)
Gene ID: HRGMv2_2031_3_44
Type: TC
Location: 51542 - 52567 (-)
Gene ID: HRGMv2_2031_3_45
Type: CAZyme
Location: 52854 - 53855 (-)
Gene ID: HRGMv2_2031_3_46
Type: CAZyme
Location: 54463 - 56898 (-)
Gene ID: HRGMv2_2031_3_47
Type: CAZyme
Location: 56850 - 59552 (-)
Gene ID: HRGMv2_2031_3_48
Type: TC
Location: 59674 - 60852 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
MOL361
→
Family
Turicibacteraceae
→
Genus
Turicibacter
→
Species
Turicibacter bilis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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