Cluster: HRGMv2_2022_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2022
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2022_17 | HRGMv2_2022_17_1 | 109 | 813 | - | GT2 |
| pfam | HRGMv2_2022_17 | HRGMv2_2022_17_2 | 834 | 3128 | - | DEAD | Helicase_C | ResIII | DSHCT | DEXQc_Suv3 |
| pfam | HRGMv2_2022_17 | HRGMv2_2022_17_3 | 3128 | 4156 | - | DAHP_synth_1 | DAHP_snth_FXD |
| TC | HRGMv2_2022_17 | HRGMv2_2022_17_4 | 4185 | 5558 | - | 3.A.5.1.1 |
| peptidase | HRGMv2_2022_17 | HRGMv2_2022_17_5 | 5564 | 6181 | - | S14.UPW |
| NULL(UNKNOWN) | HRGMv2_2022_17 | HRGMv2_2022_17_6 | 6279 | 6800 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2022_17 | HRGMv2_2022_17_7 | 6839 | 8191 | + | 2.A.66.1.25 |
Gene ID: HRGMv2_2022_17_1
Type: CAZyme
Location: 109 - 813 (-)
Type: CAZyme
Location: 109 - 813 (-)
Gene ID: HRGMv2_2022_17_2
Type: pfam
Location: 834 - 3128 (-)
Type: pfam
Location: 834 - 3128 (-)
Gene ID: HRGMv2_2022_17_3
Type: pfam
Location: 3128 - 4156 (-)
Type: pfam
Location: 3128 - 4156 (-)
Gene ID: HRGMv2_2022_17_4
Type: TC
Location: 4185 - 5558 (-)
Type: TC
Location: 4185 - 5558 (-)
Gene ID: HRGMv2_2022_17_5
Type: peptidase
Location: 5564 - 6181 (-)
Type: peptidase
Location: 5564 - 6181 (-)
Gene ID: HRGMv2_2022_17_6
Type:
Location: 6279 - 6800 (+)
Type:
Location: 6279 - 6800 (+)
Gene ID: HRGMv2_2022_17_7
Type: TC
Location: 6839 - 8191 (+)
Type: TC
Location: 6839 - 8191 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
RUG841
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.