Cluster: HRGMv2_2018_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2018
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2018_95 | HRGMv2_2018_95_2 | 471 | 1571 | - | GT28 |
| TC | HRGMv2_2018_95 | HRGMv2_2018_95_3 | 1564 | 2781 | - | 2.A.103.1.3 |
| pfam | HRGMv2_2018_95 | HRGMv2_2018_95_4 | 2729 | 4084 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_2018_95 | HRGMv2_2018_95_5 | 4084 | 5064 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_2018_95_2
Type: CAZyme
Location: 471 - 1571 (-)
Type: CAZyme
Location: 471 - 1571 (-)
Gene ID: HRGMv2_2018_95_3
Type: TC
Location: 1564 - 2781 (-)
Type: TC
Location: 1564 - 2781 (-)
Gene ID: HRGMv2_2018_95_4
Type: pfam
Location: 2729 - 4084 (-)
Type: pfam
Location: 2729 - 4084 (-)
Gene ID: HRGMv2_2018_95_5
Type: TC
Location: 4084 - 5064 (-)
Type: TC
Location: 4084 - 5064 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
UBA1221
Species
UBA1221 sp900770525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.