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Cluster: HRGMv2_2017_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2017_2 HRGMv2_2017_2_777 814909 817260 - 3.A.11.1.1
TF HRGMv2_2017_2 HRGMv2_2017_2_778 817241 817474 - HTH_3
pfam HRGMv2_2017_2 HRGMv2_2017_2_779 817627 817899 + Trns_repr_metal
TC HRGMv2_2017_2 HRGMv2_2017_2_780 817905 818603 + 2.A.4.3.9
NULL(UNKNOWN) HRGMv2_2017_2 HRGMv2_2017_2_781 818894 819595 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2017_2 HRGMv2_2017_2_782 819604 819939 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2017_2 HRGMv2_2017_2_783 820029 820853 - 3.A.1.1.34
TC HRGMv2_2017_2 HRGMv2_2017_2_784 821048 822985 + 1.B.33.1.1
pfam HRGMv2_2017_2 HRGMv2_2017_2_785 823011 823466 + OmpH
pfam HRGMv2_2017_2 HRGMv2_2017_2_786 823510 824973 + FHIPEP
CAZyme HRGMv2_2017_2 HRGMv2_2017_2_787 825009 827207 + GH77
Gene ID: HRGMv2_2017_2_777
Type: TC
Location: 814909 - 817260 (-)
Gene ID: HRGMv2_2017_2_778
Type: TF
Location: 817241 - 817474 (-)
Gene ID: HRGMv2_2017_2_779
Type: pfam
Location: 817627 - 817899 (+)
Gene ID: HRGMv2_2017_2_780
Type: TC
Location: 817905 - 818603 (+)
Gene ID: HRGMv2_2017_2_781
Type:
Location: 818894 - 819595 (-)
Gene ID: HRGMv2_2017_2_782
Type:
Location: 819604 - 819939 (-)
Gene ID: HRGMv2_2017_2_783
Type: TC
Location: 820029 - 820853 (-)
Gene ID: HRGMv2_2017_2_784
Type: TC
Location: 821048 - 822985 (+)
Gene ID: HRGMv2_2017_2_785
Type: pfam
Location: 823011 - 823466 (+)
Gene ID: HRGMv2_2017_2_786
Type: pfam
Location: 823510 - 824973 (+)
Gene ID: HRGMv2_2017_2_787
Type: CAZyme
Location: 825009 - 827207 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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