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Cluster: HRGMv2_2017_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2017_2 HRGMv2_2017_2_715 753053 754126 + GT4
TC HRGMv2_2017_2 HRGMv2_2017_2_716 754222 755760 + 2.A.25.1.3
NULL(UNKNOWN) HRGMv2_2017_2 HRGMv2_2017_2_717 756050 757753 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2017_2 HRGMv2_2017_2_718 757975 759006 - 8.A.59.4.1
STP HRGMv2_2017_2 HRGMv2_2017_2_719 759074 759352 + ACT
STP HRGMv2_2017_2 HRGMv2_2017_2_720 759466 760620 - Aminotran_1_2
CAZyme HRGMv2_2017_2 HRGMv2_2017_2_721 760917 762140 + GT30
STP HRGMv2_2017_2 HRGMv2_2017_2_722 762154 764316 - Fer4 | Fer4
NULL(UNKNOWN) HRGMv2_2017_2 HRGMv2_2017_2_723 764332 764952 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2017_2 HRGMv2_2017_2_724 765035 765892 - GT8
Gene ID: HRGMv2_2017_2_715
Type: CAZyme
Location: 753053 - 754126 (+)
Gene ID: HRGMv2_2017_2_716
Type: TC
Location: 754222 - 755760 (+)
Gene ID: HRGMv2_2017_2_717
Type:
Location: 756050 - 757753 (-)
Gene ID: HRGMv2_2017_2_718
Type: TC
Location: 757975 - 759006 (-)
Gene ID: HRGMv2_2017_2_719
Type: STP
Location: 759074 - 759352 (+)
Gene ID: HRGMv2_2017_2_720
Type: STP
Location: 759466 - 760620 (-)
Gene ID: HRGMv2_2017_2_721
Type: CAZyme
Location: 760917 - 762140 (+)
Gene ID: HRGMv2_2017_2_722
Type: STP
Location: 762154 - 764316 (-)
Gene ID: HRGMv2_2017_2_723
Type:
Location: 764332 - 764952 (-)
Gene ID: HRGMv2_2017_2_724
Type: CAZyme
Location: 765035 - 765892 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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