Cluster: HRGMv2_2017_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2017
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2017_2 | HRGMv2_2017_2_437 | 469358 | 470338 | + | 9.B.146.1.6 |
| pfam | HRGMv2_2017_2 | HRGMv2_2017_2_438 | 470341 | 471690 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_2017_2 | HRGMv2_2017_2_439 | 471671 | 472879 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2017_2 | HRGMv2_2017_2_440 | 472863 | 473996 | + | GT28 |
Gene ID: HRGMv2_2017_2_437
Type: TC
Location: 469358 - 470338 (+)
Type: TC
Location: 469358 - 470338 (+)
Gene ID: HRGMv2_2017_2_438
Type: pfam
Location: 470341 - 471690 (+)
Type: pfam
Location: 470341 - 471690 (+)
Gene ID: HRGMv2_2017_2_439
Type: TC
Location: 471671 - 472879 (+)
Type: TC
Location: 471671 - 472879 (+)
Gene ID: HRGMv2_2017_2_440
Type: CAZyme
Location: 472863 - 473996 (+)
Type: CAZyme
Location: 472863 - 473996 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
UBA6984
Species
UBA6984 sp003258725
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.