dbCAN Logo

Cluster: HRGMv2_2017_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2017_8 HRGMv2_2017_8_45 42561 44630 + GH38
NULL(UNKNOWN) HRGMv2_2017_8 HRGMv2_2017_8_46 44701 45372 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2017_8 HRGMv2_2017_8_47 45460 47958 - GH57
NULL(UNKNOWN) HRGMv2_2017_8 HRGMv2_2017_8_48 48028 48609 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2017_8 HRGMv2_2017_8_49 48923 49837 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2017_8 HRGMv2_2017_8_50 49870 51972 + 3.A.11.1.3
TC HRGMv2_2017_8 HRGMv2_2017_8_51 51988 54003 + 3.A.15.4.1
TC HRGMv2_2017_8 HRGMv2_2017_8_52 54015 55220 + 3.A.15.4.1
Gene ID: HRGMv2_2017_8_45
Type: CAZyme
Location: 42561 - 44630 (+)
Gene ID: HRGMv2_2017_8_46
Type:
Location: 44701 - 45372 (-)
Gene ID: HRGMv2_2017_8_47
Type: CAZyme
Location: 45460 - 47958 (-)
Gene ID: HRGMv2_2017_8_48
Type:
Location: 48028 - 48609 (-)
Gene ID: HRGMv2_2017_8_49
Type:
Location: 48923 - 49837 (+)
Gene ID: HRGMv2_2017_8_50
Type: TC
Location: 49870 - 51972 (+)
Gene ID: HRGMv2_2017_8_51
Type: TC
Location: 51988 - 54003 (+)
Gene ID: HRGMv2_2017_8_52
Type: TC
Location: 54015 - 55220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List