Cluster: HRGMv2_2013_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2013
- CGC Family ID: CGCFAM_09928
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2013_1 | HRGMv2_2013_1_162 | 176818 | 177795 | + | GH3 |
| peptidase | HRGMv2_2013_1 | HRGMv2_2013_1_163 | 177781 | 178992 | - | S11.UPW |
| pfam | HRGMv2_2013_1 | HRGMv2_2013_1_164 | 179191 | 179724 | - | DUF1836 |
| TC | HRGMv2_2013_1 | HRGMv2_2013_1_165 | 179845 | 181761 | + | 4.C.1.1.14 |
Gene ID: HRGMv2_2013_1_162
Type: CAZyme
Location: 176818 - 177795 (+)
Type: CAZyme
Location: 176818 - 177795 (+)
Gene ID: HRGMv2_2013_1_163
Type: peptidase
Location: 177781 - 178992 (-)
Type: peptidase
Location: 177781 - 178992 (-)
Gene ID: HRGMv2_2013_1_164
Type: pfam
Location: 179191 - 179724 (-)
Type: pfam
Location: 179191 - 179724 (-)
Gene ID: HRGMv2_2013_1_165
Type: TC
Location: 179845 - 181761 (+)
Type: TC
Location: 179845 - 181761 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
UBA6984
Species
UBA6984 sp900550295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.