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Cluster: HRGMv2_2013_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2013_8 HRGMv2_2013_8_59 54150 55355 - 3.A.15.4.1
TC HRGMv2_2013_8 HRGMv2_2013_8_60 55366 57381 - 3.A.15.4.1
TC HRGMv2_2013_8 HRGMv2_2013_8_61 57395 59530 - 3.A.11.1.3
NULL(UNKNOWN) HRGMv2_2013_8 HRGMv2_2013_8_62 59566 60480 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2013_8 HRGMv2_2013_8_63 60808 61383 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2013_8 HRGMv2_2013_8_64 61453 63951 + GH57
NULL(UNKNOWN) HRGMv2_2013_8 HRGMv2_2013_8_65 64038 64496 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2013_8 HRGMv2_2013_8_66 64546 64932 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2013_8 HRGMv2_2013_8_67 65040 67106 - GH38
Gene ID: HRGMv2_2013_8_59
Type: TC
Location: 54150 - 55355 (-)
Gene ID: HRGMv2_2013_8_60
Type: TC
Location: 55366 - 57381 (-)
Gene ID: HRGMv2_2013_8_61
Type: TC
Location: 57395 - 59530 (-)
Gene ID: HRGMv2_2013_8_62
Type:
Location: 59566 - 60480 (-)
Gene ID: HRGMv2_2013_8_63
Type:
Location: 60808 - 61383 (+)
Gene ID: HRGMv2_2013_8_64
Type: CAZyme
Location: 61453 - 63951 (+)
Gene ID: HRGMv2_2013_8_65
Type:
Location: 64038 - 64496 (+)
Gene ID: HRGMv2_2013_8_66
Type:
Location: 64546 - 64932 (-)
Gene ID: HRGMv2_2013_8_67
Type: CAZyme
Location: 65040 - 67106 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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