Cluster: HRGMv2_2011_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2011
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2011_5 | HRGMv2_2011_5_9 | 6801 | 7772 | + | 9.B.146.1.6 |
| pfam | HRGMv2_2011_5 | HRGMv2_2011_5_10 | 7784 | 9133 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_2011_5 | HRGMv2_2011_5_11 | 9114 | 10304 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2011_5 | HRGMv2_2011_5_12 | 10297 | 11418 | + | GT28 |
| NULL(UNKNOWN) | HRGMv2_2011_5 | HRGMv2_2011_5_13 | 11704 | 12225 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2011_5 | HRGMv2_2011_5_14 | 12299 | 13459 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_2011_5 | HRGMv2_2011_5_15 | 13437 | 14996 | - | GT2 |
Gene ID: HRGMv2_2011_5_9
Type: TC
Location: 6801 - 7772 (+)
Type: TC
Location: 6801 - 7772 (+)
Gene ID: HRGMv2_2011_5_10
Type: pfam
Location: 7784 - 9133 (+)
Type: pfam
Location: 7784 - 9133 (+)
Gene ID: HRGMv2_2011_5_11
Type: TC
Location: 9114 - 10304 (+)
Type: TC
Location: 9114 - 10304 (+)
Gene ID: HRGMv2_2011_5_12
Type: CAZyme
Location: 10297 - 11418 (+)
Type: CAZyme
Location: 10297 - 11418 (+)
Gene ID: HRGMv2_2011_5_13
Type:
Location: 11704 - 12225 (+)
Type:
Location: 11704 - 12225 (+)
Gene ID: HRGMv2_2011_5_14
Type: pfam
Location: 12299 - 13459 (+)
Type: pfam
Location: 12299 - 13459 (+)
Gene ID: HRGMv2_2011_5_15
Type: CAZyme
Location: 13437 - 14996 (-)
Type: CAZyme
Location: 13437 - 14996 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Scatenecus
Species
Scatenecus sp900554095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.