Cluster: HRGMv2_2011_CGC2

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_2011_3	HRGMv2_2011_3_57	53946	55604	+	2.A.21.9.1
STP	HRGMv2_2011_3	HRGMv2_2011_3_58	55929	56786	+	HEAT_PBS \| HEAT_PBS
pfam	HRGMv2_2011_3	HRGMv2_2011_3_59	57146	57853	+	DUF6613
CAZyme	HRGMv2_2011_3	HRGMv2_2011_3_60	57862	58647	-	GT2
pfam	HRGMv2_2011_3	HRGMv2_2011_3_61	58647	59021	-	Ribosomal_S30AE
NULL(UNKNOWN)	HRGMv2_2011_3	HRGMv2_2011_3_62	59104	59307	-	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2011_3	HRGMv2_2011_3_63	59680	60222	-	2.A.107.1.2

Gene ID: HRGMv2_2011_3_57
Type: TC
Location: 53946 - 55604 (+)

Gene ID: HRGMv2_2011_3_58
Type: STP
Location: 55929 - 56786 (+)

Gene ID: HRGMv2_2011_3_59
Type: pfam
Location: 57146 - 57853 (+)

Gene ID: HRGMv2_2011_3_60
Type: CAZyme
Location: 57862 - 58647 (-)

Gene ID: HRGMv2_2011_3_61
Type: pfam
Location: 58647 - 59021 (-)

Gene ID: HRGMv2_2011_3_62
Type:
Location: 59104 - 59307 (-)

Gene ID: HRGMv2_2011_3_63
Type: TC
Location: 59680 - 60222 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_2011_3_58	vegetarian > omnivore	1.30569	0.02973
HRGMv2_2011_3_62	vegan > omnivore	20.84762	0.02250
HRGMv2_2011_3_62	vegetarian > omnivore	22.70900	0.02973