Cluster: HRGMv2_2011_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2011
- CGC Family ID: CGCFAM_06085
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2011_16 | HRGMv2_2011_16_10 | 12215 | 13438 | - | 3.A.15.3.1 |
| TC | HRGMv2_2011_16 | HRGMv2_2011_16_11 | 13447 | 15459 | - | 3.A.15.4.1 |
| TC | HRGMv2_2011_16 | HRGMv2_2011_16_12 | 15469 | 17415 | - | 1.B.22.1.1 |
| NULL(UNKNOWN) | HRGMv2_2011_16 | HRGMv2_2011_16_13 | 17437 | 18186 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2011_16 | HRGMv2_2011_16_14 | 18388 | 19245 | - | PRK |
| TC | HRGMv2_2011_16 | HRGMv2_2011_16_15 | 19426 | 20835 | + | 3.A.2.1.2 |
| pfam | HRGMv2_2011_16 | HRGMv2_2011_16_16 | 20846 | 21238 | + | ATP-synt_DE | ATP-synt_DE_N |
| TC | HRGMv2_2011_16 | HRGMv2_2011_16_17 | 21243 | 21791 | + | 2.A.51.1.6 |
| TC | HRGMv2_2011_16 | HRGMv2_2011_16_18 | 21788 | 22315 | + | 2.A.51.1.6 |
| NULL(UNKNOWN) | HRGMv2_2011_16 | HRGMv2_2011_16_19 | 22488 | 23120 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2011_16 | HRGMv2_2011_16_20 | 23117 | 24646 | - | S16.UNW |
| CAZyme | HRGMv2_2011_16 | HRGMv2_2011_16_21 | 24711 | 25706 | + | GT9 |
Gene ID: HRGMv2_2011_16_10
Type: TC
Location: 12215 - 13438 (-)
Type: TC
Location: 12215 - 13438 (-)
Gene ID: HRGMv2_2011_16_11
Type: TC
Location: 13447 - 15459 (-)
Type: TC
Location: 13447 - 15459 (-)
Gene ID: HRGMv2_2011_16_12
Type: TC
Location: 15469 - 17415 (-)
Type: TC
Location: 15469 - 17415 (-)
Gene ID: HRGMv2_2011_16_13
Type:
Location: 17437 - 18186 (-)
Type:
Location: 17437 - 18186 (-)
Gene ID: HRGMv2_2011_16_14
Type: pfam
Location: 18388 - 19245 (-)
Type: pfam
Location: 18388 - 19245 (-)
Gene ID: HRGMv2_2011_16_15
Type: TC
Location: 19426 - 20835 (+)
Type: TC
Location: 19426 - 20835 (+)
Gene ID: HRGMv2_2011_16_16
Type: pfam
Location: 20846 - 21238 (+)
Type: pfam
Location: 20846 - 21238 (+)
Gene ID: HRGMv2_2011_16_17
Type: TC
Location: 21243 - 21791 (+)
Type: TC
Location: 21243 - 21791 (+)
Gene ID: HRGMv2_2011_16_18
Type: TC
Location: 21788 - 22315 (+)
Type: TC
Location: 21788 - 22315 (+)
Gene ID: HRGMv2_2011_16_19
Type:
Location: 22488 - 23120 (+)
Type:
Location: 22488 - 23120 (+)
Gene ID: HRGMv2_2011_16_20
Type: peptidase
Location: 23117 - 24646 (-)
Type: peptidase
Location: 23117 - 24646 (-)
Gene ID: HRGMv2_2011_16_21
Type: CAZyme
Location: 24711 - 25706 (+)
Type: CAZyme
Location: 24711 - 25706 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Scatenecus
Species
Scatenecus sp900554095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.