Cluster: HRGMv2_2009_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2009
- CGC Family ID: CGCFAM_07047
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2009_207 | HRGMv2_2009_207_5 | 2609 | 3334 | - | 1.B.42.1.2 |
| TC | HRGMv2_2009_207 | HRGMv2_2009_207_6 | 3516 | 5198 | + | 4.C.1.1.7 |
| pfam | HRGMv2_2009_207 | HRGMv2_2009_207_7 | 5236 | 5712 | + | UDG |
| TC | HRGMv2_2009_207 | HRGMv2_2009_207_8 | 5851 | 7686 | - | 9.B.34.1.3 |
| NULL(UNKNOWN) | HRGMv2_2009_207 | HRGMv2_2009_207_9 | 7683 | 7862 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2009_207 | HRGMv2_2009_207_10 | 8189 | 9574 | + | GT2 |
Gene ID: HRGMv2_2009_207_5
Type: TC
Location: 2609 - 3334 (-)
Type: TC
Location: 2609 - 3334 (-)
Gene ID: HRGMv2_2009_207_6
Type: TC
Location: 3516 - 5198 (+)
Type: TC
Location: 3516 - 5198 (+)
Gene ID: HRGMv2_2009_207_7
Type: pfam
Location: 5236 - 5712 (+)
Type: pfam
Location: 5236 - 5712 (+)
Gene ID: HRGMv2_2009_207_8
Type: TC
Location: 5851 - 7686 (-)
Type: TC
Location: 5851 - 7686 (-)
Gene ID: HRGMv2_2009_207_9
Type:
Location: 7683 - 7862 (-)
Type:
Location: 7683 - 7862 (-)
Gene ID: HRGMv2_2009_207_10
Type: CAZyme
Location: 8189 - 9574 (+)
Type: CAZyme
Location: 8189 - 9574 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Spyradomonas
Species
Spyradomonas excrementavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.