Cluster: HRGMv2_2009_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2009
- CGC Family ID: CGCFAM_09923
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2009_152 | HRGMv2_2009_152_9 | 6021 | 6731 | + | GT19 |
| NULL(UNKNOWN) | HRGMv2_2009_152 | HRGMv2_2009_152_10 | 6821 | 8584 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2009_152 | HRGMv2_2009_152_11 | 8640 | 9737 | + | HATPase_c | HisKA | Response_reg |
| TC | HRGMv2_2009_152 | HRGMv2_2009_152_12 | 9816 | 11417 | - | 1.A.33.1.4 |
| TC | HRGMv2_2009_152 | HRGMv2_2009_152_13 | 11390 | 11632 | - | 3.A.9.1.1 |
Gene ID: HRGMv2_2009_152_9
Type: CAZyme
Location: 6021 - 6731 (+)
Type: CAZyme
Location: 6021 - 6731 (+)
Gene ID: HRGMv2_2009_152_10
Type:
Location: 6821 - 8584 (+)
Type:
Location: 6821 - 8584 (+)
Gene ID: HRGMv2_2009_152_11
Type: STP
Location: 8640 - 9737 (+)
Type: STP
Location: 8640 - 9737 (+)
Gene ID: HRGMv2_2009_152_12
Type: TC
Location: 9816 - 11417 (-)
Type: TC
Location: 9816 - 11417 (-)
Gene ID: HRGMv2_2009_152_13
Type: TC
Location: 11390 - 11632 (-)
Type: TC
Location: 11390 - 11632 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Spyradomonas
Species
Spyradomonas excrementavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.